CDS

Accession Number TCMCG057C27760
gbkey CDS
Protein Id XP_018432855.1
Location join(35590992..35591433,35591509..35592236,35592303..35592392,35592481..35592768,35592849..35593058,35593154..35593399)
Gene LOC108805337
GeneID 108805337
Organism Raphanus sativus

Protein

Length 667aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018577353.1
Definition PREDICTED: protein INVOLVED IN DE NOVO 2-like isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category S
Description XH XS domain-containing protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000018        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005655        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006282        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006305        [VIEW IN EMBL-EBI]
GO:0006306        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006342        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010035        [VIEW IN EMBL-EBI]
GO:0010038        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010569        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030677        [VIEW IN EMBL-EBI]
GO:0030681        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044452        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044728        [VIEW IN EMBL-EBI]
GO:0045814        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046686        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902555        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1905348        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2000779        [VIEW IN EMBL-EBI]
GO:2001020        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATAAAAAAAGGAATAACGTTTCAGTTTCTTTTTTGGAACACAAAGATGGGTAGTACGGTGGTTTTAACCTCAGACGAAGATGATTCAGACATAGGCGAATCCGAAATGGAAGATCATGCAGACAAAATCTACCAAACTCTCAAATCCGGAAAGCTGAAAGTGAAACTCTCTCCACAAGCCTTCACGTGTCCTTACTGTCCAAACAAGAAGAAGAAACCAAGTTTCCAGTACAAAGATCTCCTCCAACACGCTTCCGGAGTTGGTAACAGCAACTCAGAGAAACGAACCTCAAAGGAGAAAGCATCCCACCTCGCTCTCGTCAAGTACCTCCAACTTGATCTTGCTGACTCAGAAGAATCTGGAGAGCCTTCATCTAATAAGCGCCAAAAAACCATTCAAGACTGTGACCAGGACGAGAAGCTCGTCTGTCCTTGGAAAGGTGTTGTGGTTAACATTCCAACAAGAAAGACTCAAGACGGTCGATCAGCTGGTGAGAGCGGGTCCAAGCTTAGAGACGAGTACATTCAGAGAGGGTTCAACCCTACTAGGGTTCGTCCCTTATGGAACCACCGGGGGTTTTCAGGAACGGCTATTGTGGATTTCAGCAACGACTGGAACGGACTACACAGCGCTCTTCTCTTTGACAAGGCTTACCAAGTAGATGGCCATGGGAGAAAAGACTGGTTGAAGAAAGATGGGTCCAACTCCAAGTTAGGGCTTTACGCATGGATAGCTCGTGCTGATGATTACAACGGAAGTACTCTAGTGGGAGAAGACTTGAGGAAGAAGGGTGATCTCAAGACTATAGCTGAGGTTAACGAAGAGGAGGCGAGGAAACAGGAGAGGCTCGTGGAGAATCTGACGCAGCTCGTGGAGGTGAAGAAGAGAGGGGTGAAGGAGTTCGAGGAGATGTGTTGGGTGAAGTCTAGGGAGCTTAAAGAGAAGCTGGAAGAGAAGGAGGAGAGTTTGCAAAGGCATAACAGAGAGCTGAATGCTATACAGGAGAGAACGATGGGTCATGTTAACAAGATCTTCGCTGATCATGAGAGGTTGAAGATGCGGTTGGAGTTGGAGAAGAAGAAGCTTGAGCTCAAAGGTATTGAGTTGGCTAAGAGGGAAGCACACAATGAAACCGAGAGACAGAACTTGTCTGAAGATCTACAACAGAATGCCTCCAAGAATAGCTCTCTTGAACTAGCTTCCATGGAACAACAAAAGGCAGACGAAGAAGTCAAGAAGCTAGCTGAATATCAAAGGAGGCAAAAGGAGGAGCTTCATGAGAAAATCATAAGACTAGAGAGACAGAGAGACCAGAAACAAGCCATCGAGCTAGAGATCGAGCAGCTGAAAGGAGAGCTTAACGTGAAGAGGCACATGGGATCAGATGGCGACGCTGAGATCGTGAAAGAAGTGGAAGAAATCTACAAAGGTTTGACTGAGAAGGAAGAGGAACTCGCAGACCTCGACGAGTTTAACCAAACTCTTATACTCAGAGAGCGTAGAACCAACGATGAGCTTCAAGAAGCTCGTAAAGAATTGGTTAACACTATGAAAGAGTGGAAGCTAAGTATCGGTGTAAAGAGAATGGGAGAGCTGGTGACGAAACCATTCATGGATGCACTGCAGCAGAAGTATTGTCAGCAAGACGTGGAGGACAGAGCTATTGACGTTCTCCAGCTCTGGGAAGACTATCTCAAAGACCCTGATTGGCATCCATTCAAACGCATCAAGCTCCAAAATCAAGAAAGAGAAGTGGAAGTGATAGATGAGAGAGATGAAAAGCTGAGGGAGCTAAAGGAAGATTTAGGGGATGGTCCTTACAATGCGGTAACGAGAGCATTGTTGGAGATAAACGAGTATAACCCAAGTGGAAGGTACATTACAACAGAGCTGTGGAATTTACAAGAAGACAGAAAGGCTACACTTGAAGAAGGTGTCACTTGTTTGCTTGATCAATGGGAAAAGTCTAAAAGTCTAAACGCCGCTGATGCGGTTTTGTAG
Protein:  
MIKKGITFQFLFWNTKMGSTVVLTSDEDDSDIGESEMEDHADKIYQTLKSGKLKVKLSPQAFTCPYCPNKKKKPSFQYKDLLQHASGVGNSNSEKRTSKEKASHLALVKYLQLDLADSEESGEPSSNKRQKTIQDCDQDEKLVCPWKGVVVNIPTRKTQDGRSAGESGSKLRDEYIQRGFNPTRVRPLWNHRGFSGTAIVDFSNDWNGLHSALLFDKAYQVDGHGRKDWLKKDGSNSKLGLYAWIARADDYNGSTLVGEDLRKKGDLKTIAEVNEEEARKQERLVENLTQLVEVKKRGVKEFEEMCWVKSRELKEKLEEKEESLQRHNRELNAIQERTMGHVNKIFADHERLKMRLELEKKKLELKGIELAKREAHNETERQNLSEDLQQNASKNSSLELASMEQQKADEEVKKLAEYQRRQKEELHEKIIRLERQRDQKQAIELEIEQLKGELNVKRHMGSDGDAEIVKEVEEIYKGLTEKEEELADLDEFNQTLILRERRTNDELQEARKELVNTMKEWKLSIGVKRMGELVTKPFMDALQQKYCQQDVEDRAIDVLQLWEDYLKDPDWHPFKRIKLQNQEREVEVIDERDEKLRELKEDLGDGPYNAVTRALLEINEYNPSGRYITTELWNLQEDRKATLEEGVTCLLDQWEKSKSLNAADAVL